Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC027612.4-201ENST00000605371 583 ntBASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 AC089987.1-201ENST00000551654 2209 ntBASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
R3HCC1Q9Y3T6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
R3HCC1Q9Y3T6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.64■□□□□ 0.42
R3HCC1Q9Y3T6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
R3HCC1Q9Y3T6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
R3HCC1Q9Y3T6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 ALG1L8P-201ENST00000533887 760 ntBASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AC093520.2-201ENST00000561830 333 ntBASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AC084121.4-201ENST00000641598 221 ntBASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 AF228730.8-201ENST00000642140 221 ntBASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 HSPA7-201ENST00000445535 1927 ntBASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.64■□□□□ 0.41
R3HCC1Q9Y3T6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AC142381.1-201ENST00000426099 345 ntBASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 FAM58DP-201ENST00000428076 619 ntBASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 HLA-J-203ENST00000494367 1087 ntBASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AL365330.1-201ENST00000607459 531 ntBASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
R3HCC1Q9Y3T6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms