Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC098614.1-201ENST00000368528 745 ntBASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 ACA64.2-201ENST00000459014 129 ntBASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 TMEM261P1-201ENST00000604899 340 ntBASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC144831.1-201ENST00000573312 2656 ntBASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPH3AQ9Y2J0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SBF1P1-201ENST00000444527 5631 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC126177.1-201ENST00000547829 2218 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC079776.1-201ENST00000401540 1152 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AL359711.2-201ENST00000563105 872 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 MIR6805-201ENST00000615055 62 ntBASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPH3AQ9Y2J0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
RPH3AQ9Y2J0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms