Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AC010328.2-201ENST00000597698 1111 ntBASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AP005019.2-201ENST00000615104 511 ntBASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 MIR6869-201ENST00000619434 62 ntBASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 AL133338.1-201ENST00000565695 1517 ntBASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXD3Q9UJU5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 DUX4L45-201ENST00000566406 1057 ntBASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXD3Q9UJU5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FOXD3Q9UJU5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms