Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 POU5F1P2-201ENST00000521750 823 ntBASIC21.73■■□□□ 1.07
STAG3Q9UJ98 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG3Q9UJ98 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AL627231.1-201ENST00000394467 1125 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AC010141.1-201ENST00000411585 623 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AC078991.1-201ENST00000437297 610 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 HLA-J-204ENST00000495278 958 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AC087045.2-201ENST00000606279 1003 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 AC092171.5-201ENST00000608012 942 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 TNRC18P3-201ENST00000441896 2691 ntBASIC21.72■■□□□ 1.07
STAG3Q9UJ98 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG3Q9UJ98 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 RPL5P21-201ENST00000404620 815 ntBASIC21.71■■□□□ 1.07
STAG3Q9UJ98 RPSAP31-201ENST00000416648 895 ntBASIC21.71■■□□□ 1.07
STAG3Q9UJ98 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.71■■□□□ 1.07
STAG3Q9UJ98 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.71■■□□□ 1.07
STAG3Q9UJ98 AC020910.5-201ENST00000623668 1865 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms