Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 U82695.1-201ENST00000635752 1889 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 BEND3P3-201ENST00000611030 2440 ntBASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBQLN2Q9UHD9 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13□□□□□ -0.33
UBQLN2Q9UHD9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms