Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 SIRPB3P-201ENST00000340424 1216 ntBASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 FAM86JP-202ENST00000484500 988 ntBASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
RIMBP3Q9UFD9 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 HNRNPA1P21-201ENST00000424115 961 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 RN7SL87P-201ENST00000497657 288 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 MST1L-204ENST00000545160 559 ntTSL 4 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 AL390961.4-201ENST00000623958 2535 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 AC112504.1-201ENST00000623415 1841 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 AC026884.1-201ENST00000418296 457 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 AC022001.3-201ENST00000606330 596 ntBASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC23.22■■□□□ 1.31
RIMBP3Q9UFD9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AP000244.1-201ENST00000424582 201 ntBASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 SAP18P2-201ENST00000434334 459 ntBASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AC112220.4-201ENST00000604982 1263 ntBASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RIMBP3Q9UFD9 SLC9A7P1-202ENST00000556476 2239 ntBASIC23.2■■□□□ 1.31
RIMBP3Q9UFD9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 AL121949.1-201ENST00000402043 968 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 FTH1P18-201ENST00000412071 549 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 AC008494.1-201ENST00000497612 796 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 SNORD3B-1-201ENST00000577988 758 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 RN7SL478P-201ENST00000584358 298 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 AL591122.2-201ENST00000624125 1853 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms