Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CTSFQ9UBX1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC136621.1-201ENST00000624017 2304 ntBASIC14.38□□□□□ -0.11
CTSFQ9UBX1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 FAM21FP-201ENST00000426241 1131 ntBASIC14.38□□□□□ -0.11
CTSFQ9UBX1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.38□□□□□ -0.11
CTSFQ9UBX1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 DBET-201ENST00000630918 3363 ntBASIC14.38□□□□□ -0.11
CTSFQ9UBX1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSFQ9UBX1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AL359258.3-201ENST00000622910 2331 ntBASIC14.37□□□□□ -0.11
CTSFQ9UBX1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC104581.4-201ENST00000623126 3052 ntBASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC104457.1-201ENST00000401024 814 ntBASIC14.37□□□□□ -0.11
CTSFQ9UBX1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 YBX1P6-201ENST00000442962 1002 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms