Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 RPL13AP20-201ENST00000459725 609 ntBASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 TMBIM7P-203ENST00000641617 1718 ntBASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC6Q9UBN7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AC020907.1-201ENST00000616460 1350 ntBASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 CNN2P8-201ENST00000421872 913 ntBASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 GAPDHP40-201ENST00000505218 1006 ntBASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AC008687.7-202ENST00000637404 953 ntBASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC6Q9UBN7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AC091951.1-201ENST00000512854 2465 ntBASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms