Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 C1QBPP1-201ENST00000400117 770 ntBASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 GHSR-202ENST00000427970 912 ntBASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
CUEDC1Q9NWM3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CUEDC1Q9NWM3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AP005482.1-201ENST00000563722 1273 ntBASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AL645728.2-202ENST00000641679 227 ntBASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 AL138799.1-201ENST00000448213 1675 ntBASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.83□□□□□ -0.04
CUEDC1Q9NWM3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 SAMD11P1-201ENST00000571429 661 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms