Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 TIMM17BP1-201ENST00000545713 516 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC027796.2-201ENST00000575326 344 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC015911.4-201ENST00000588022 1070 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AL844908.2-201ENST00000609461 460 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC004461.2-201ENST00000629517 803 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 AC007326.2-201ENST00000624224 7579 ntBASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRTM1Q9HBL6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC007787.1-201ENST00000588095 1583 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 ZNF890P-202ENST00000530367 1156 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 SAMD11P1-201ENST00000571429 661 ntBASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRTM1Q9HBL6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms