Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AC078991.1-201ENST00000437297 610 ntBASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 RTN3P1-201ENST00000536295 711 ntBASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 AC092171.5-201ENST00000608012 942 ntBASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 CASP16P-204ENST00000635032 809 ntBASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2OQ9C0C9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 KRT8P4-201ENST00000509735 1454 ntBASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 AL133267.1-201ENST00000398220 340 ntBASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 AC141586.1-203ENST00000567242 366 ntBASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 RN7SL713P-201ENST00000582127 302 ntBASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 ZACNP1-201ENST00000612259 710 ntBASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2OQ9C0C9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 LRRC59-203ENST00000576448 1531 ntBASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 RNMTL1P1-201ENST00000454103 560 ntBASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 AC116345.2-201ENST00000512837 523 ntBASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 RN7SL163P-201ENST00000583100 276 ntBASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2OQ9C0C9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms