Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC100850.1-201ENST00000506768 649 ntBASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC000095.1-201ENST00000603208 874 ntBASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 NAP1L6-202ENST00000641404 1222 ntBASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 TUBB8P7-204ENST00000567960 1332 ntBASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CNTNAP3Q9BZ76 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC005915.1-201ENST00000624912 2018 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 KRT8P4-201ENST00000509735 1454 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 BAK1P1-201ENST00000317045 636 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 RN7SKP214-201ENST00000364208 315 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 HIST2H2BB-201ENST00000449108 381 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 RPL18AP3-201ENST00000462885 528 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 MIR5001-201ENST00000580185 100 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AL139339.2-201ENST00000608063 657 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC073911.3-201ENST00000624401 631 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 PCDHB17P-201ENST00000539533 2393 ntBASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CNTNAP3Q9BZ76 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms