Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 INGX-202ENST00000489074 768 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 KRT8P48-201ENST00000515599 1220 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 BANF1P1-201ENST00000553684 263 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC026979.3-201ENST00000607315 403 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AL354696.1-201ENST00000614652 497 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC091812.2-201ENST00000619081 385 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC009950.2-201ENST00000636548 183 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC084121.4-201ENST00000641598 221 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AF228730.8-201ENST00000642140 221 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 AC015802.1-201ENST00000588104 1449 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 BEND3P1-201ENST00000421591 1944 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 REXO1L4P-201ENST00000605109 1937 ntBASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC7.86□□□□□ -1.15
KRTAP3-1Q9BYR8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC092135.3-201ENST00000624151 1846 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AL355578.1-201ENST00000607405 1328 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC004870.1-201ENST00000315132 882 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC246787.1-201ENST00000392301 627 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC104457.1-201ENST00000401024 814 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC074338.1-201ENST00000416825 156 ntBASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.85□□□□□ -1.15
KRTAP3-1Q9BYR8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms