Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AC006058.4-201ENST00000624016 1670 ntBASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 IGLV3-15-201ENST00000518356 244 ntBASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 AC008805.1-201ENST00000590892 364 ntBASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 TBC1D3J-201ENST00000620719 1426 ntBASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTFDC1Q9BY42 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 AC239868.1-201ENST00000369385 493 ntBASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 RPSAP31-201ENST00000416648 895 ntBASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 AC051619.9-201ENST00000623237 597 ntBASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTFDC1Q9BY42 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 REXO1L4P-201ENST00000605109 1937 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 AC078875.1-201ENST00000431907 724 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 RN7SL258P-201ENST00000478664 300 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 ALG3P1-201ENST00000508806 1114 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 POU5F1P2-201ENST00000521750 823 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 RN7SL736P-201ENST00000613111 269 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.27■□□□□ 0.52
RTFDC1Q9BY42 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms