Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 SLC25A39P2-201ENST00000537614 270 ntBASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 RARRES2P9-201ENST00000565168 469 ntBASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 CICP11-201ENST00000434745 2827 ntBASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AC006504.5-208ENST00000588784 2401 ntBASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 AC005562.1-201ENST00000583030 3219 ntBASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMSS1Q9BQ75 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AC023274.1-201ENST00000418278 595 ntBASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AL353705.2-201ENST00000428243 662 ntBASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AC106730.1-201ENST00000566722 1090 ntBASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMSS1Q9BQ75 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms