Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 GNAQP1-201ENST00000444815 1067 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC092905.1-201ENST00000467527 949 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MTATP6P25-201ENST00000574491 261 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AC005785.2-201ENST00000624655 631 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 AP000720.1-201ENST00000625091 483 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.85□□□□□ -0.19
USB1Q9BQ65 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
USB1Q9BQ65 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.85□□□□□ -0.19
USB1Q9BQ65 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AL596087.1-201ENST00000400979 1969 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 TRIM36-IT1-201ENST00000503723 881 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 SLED1-202ENST00000512051 380 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 AP005018.1-201ENST00000525475 301 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AL118556.2-201ENST00000614375 824 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 AC067930.6-201ENST00000623257 4947 ntBASIC13.84□□□□□ -0.19
USB1Q9BQ65 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
USB1Q9BQ65 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
USB1Q9BQ65 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
USB1Q9BQ65 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
USB1Q9BQ65 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
USB1Q9BQ65 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
USB1Q9BQ65 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
USB1Q9BQ65 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms