Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 BANF1P1-201ENST00000553684 263 ntBASIC15.82■□□□□ 0.12
C9orf72Q96LT7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 AC007967.4-201ENST00000614700 386 ntBASIC15.82■□□□□ 0.12
C9orf72Q96LT7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 AC018529.2-202ENST00000611482 3087 ntBASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.81■□□□□ 0.12
C9orf72Q96LT7 HIST3H2BA-201ENST00000436555 524 ntBASIC15.81■□□□□ 0.12
C9orf72Q96LT7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ST20-AS1-201ENST00000560255 4223 ntBASIC15.81■□□□□ 0.12
C9orf72Q96LT7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C9orf72Q96LT7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 AC092580.3-201ENST00000430932 139 ntBASIC15.8■□□□□ 0.12
C9orf72Q96LT7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 AL512638.1-201ENST00000457493 794 ntBASIC15.8■□□□□ 0.12
C9orf72Q96LT7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 AC105021.1-202ENST00000570572 669 ntBASIC15.8■□□□□ 0.12
C9orf72Q96LT7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.8■□□□□ 0.12
C9orf72Q96LT7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms