Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AC104109.2-201ENST00000602919 1418 ntBASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 PRYP6-201ENST00000514804 343 ntBASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AL009183.1-201ENST00000603760 355 ntBASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AC010507.1-201ENST00000633895 436 ntBASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 AC055811.4-201ENST00000624039 1754 ntBASIC15.47■□□□□ 0.07
CHMP6Q96FZ7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 AC007967.2-201ENST00000432613 625 ntBASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 RNA5SP419-201ENST00000515908 135 ntBASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 IGHV3-22-201ENST00000520721 359 ntBASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 AC007064.4-201ENST00000637740 555 ntBASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP6Q96FZ7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms