Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.38□□□□□ -0.27
CPNE2Q96FN4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AL627223.1-201ENST00000416693 442 ntBASIC13.38□□□□□ -0.27
CPNE2Q96FN4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AC004835.2-201ENST00000603762 682 ntBASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AL513210.1-201ENST00000629608 234 ntBASIC13.38□□□□□ -0.27
CPNE2Q96FN4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.38□□□□□ -0.27
CPNE2Q96FN4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPNE2Q96FN4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 AL133267.1-201ENST00000398220 340 ntBASIC13.37□□□□□ -0.27
CPNE2Q96FN4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 MIR3687-2-201ENST00000577708 61 ntBASIC13.37□□□□□ -0.27
CPNE2Q96FN4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPNE2Q96FN4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms