Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF31Q96EP0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF31Q96EP0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF31Q96EP0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RNF31Q96EP0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF31Q96EP0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 AL022328.1-201ENST00000610050 478 ntBASIC14.82□□□□□ -0.04
RNF31Q96EP0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF31Q96EP0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF31Q96EP0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 SNX18-202ENST00000343017 3140 ntBASIC14.81□□□□□ -0.04
RNF31Q96EP0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC069224.1-201ENST00000566372 1715 ntBASIC14.81□□□□□ -0.04
RNF31Q96EP0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 MIR648-201ENST00000385046 94 ntBASIC14.81□□□□□ -0.04
RNF31Q96EP0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AL355864.2-201ENST00000447420 863 ntBASIC14.81□□□□□ -0.04
RNF31Q96EP0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC007551.1-201ENST00000457394 519 ntBASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RNF31Q96EP0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF31Q96EP0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms