Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 NUS1P3-201ENST00000423502 862 ntBASIC15.55■□□□□ 0.08
RTP4Q96DX8 RN7SL692P-201ENST00000464677 288 ntBASIC15.55■□□□□ 0.08
RTP4Q96DX8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 RPL13AP25-201ENST00000484130 612 ntBASIC15.55■□□□□ 0.08
RTP4Q96DX8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 TPRX2P-201ENST00000535362 881 ntBASIC15.55■□□□□ 0.08
RTP4Q96DX8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 AC099568.2-201ENST00000609194 695 ntBASIC15.55■□□□□ 0.08
RTP4Q96DX8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTP4Q96DX8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.55■□□□□ 0.08
RTP4Q96DX8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 DUX4L47-201ENST00000566374 394 ntBASIC15.54■□□□□ 0.08
RTP4Q96DX8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AP001267.2-201ENST00000532619 2086 ntBASIC15.54■□□□□ 0.08
RTP4Q96DX8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 SNX18-202ENST00000343017 3140 ntBASIC15.54■□□□□ 0.08
RTP4Q96DX8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RTP4Q96DX8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTP4Q96DX8 AC007686.3-201ENST00000619017 3487 ntBASIC15.53■□□□□ 0.08
RTP4Q96DX8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 AC015802.1-201ENST00000588104 1449 ntBASIC15.53■□□□□ 0.08
RTP4Q96DX8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTP4Q96DX8 NME2P1-201ENST00000426182 414 ntBASIC15.53■□□□□ 0.08
RTP4Q96DX8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.53■□□□□ 0.08
RTP4Q96DX8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms