Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.19■□□□□ 0.34
USP6NLQ92738 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.19■□□□□ 0.34
USP6NLQ92738 AC092364.2-201ENST00000596710 2692 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
USP6NLQ92738 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 AC112504.1-201ENST00000623415 1841 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.18■□□□□ 0.34
USP6NLQ92738 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 AL662844.4-201ENST00000606367 2838 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
USP6NLQ92738 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
USP6NLQ92738 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.18■□□□□ 0.34
USP6NLQ92738 AC006335.1-201ENST00000445200 547 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.18■□□□□ 0.34
USP6NLQ92738 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.18■□□□□ 0.34
USP6NLQ92738 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 AL160314.3-201ENST00000556041 767 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 SNORD3B-2-202ENST00000571722 791 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 RN7SL555P-201ENST00000584742 339 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 AC090164.2-201ENST00000611487 516 ntBASIC17.18■□□□□ 0.34
USP6NLQ92738 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP6NLQ92738 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP6NLQ92738 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
USP6NLQ92738 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 AL157791.1-201ENST00000553667 1699 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP6NLQ92738 GHSR-202ENST00000427970 912 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 PDIA3P2-201ENST00000428073 158 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 CEP164P1-201ENST00000455142 418 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.17■□□□□ 0.34
USP6NLQ92738 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.17■□□□□ 0.34
USP6NLQ92738 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 AC020922.3-201ENST00000595064 547 ntBASIC17.17■□□□□ 0.34
USP6NLQ92738 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.17■□□□□ 0.34
USP6NLQ92738 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.17■□□□□ 0.34
USP6NLQ92738 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms