Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCNB3Q8WWL7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCNB3Q8WWL7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CCNB3Q8WWL7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.2■■□□□ 1.31
CCNB3Q8WWL7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 BNIP3P13-201ENST00000599968 566 ntBASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 AC138696.2-201ENST00000607376 223 ntBASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 RETN-203ENST00000629642 400 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 TUBBP5-203ENST00000508529 1334 ntBASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNB3Q8WWL7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 AC091951.1-201ENST00000512854 2465 ntBASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 AC005740.2-201ENST00000511085 419 ntBASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 AC009955.4-201ENST00000597192 544 ntBASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 AC104640.1-201ENST00000562617 2109 ntBASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCNB3Q8WWL7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 RNMTL1P1-201ENST00000454103 560 ntBASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 RN7SL769P-201ENST00000469386 295 ntBASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 AL162426.1-201ENST00000624141 743 ntBASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNB3Q8WWL7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms