Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC136604.1-201ENST00000418535 575 ntBASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 ELK1P1-201ENST00000485699 580 ntBASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 HNRNPUP1-201ENST00000554987 333 ntBASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEIL3Q8TAT5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 AC011477.6-201ENST00000604980 1927 ntBASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEIL3Q8TAT5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 INE1-201ENST00000456273 945 ntBASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 SLED1-202ENST00000512051 380 ntBASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 AC036164.1-201ENST00000570544 333 ntBASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TMEM261P1-201ENST00000604899 340 ntBASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 AL158212.4-201ENST00000624062 1286 ntBASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEIL3Q8TAT5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms