Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC4Q8N9L1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 BTNL10-201ENST00000595971 695 ntBASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC4Q8N9L1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AL138709.1-201ENST00000614840 1693 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC005229.1-201ENST00000392885 409 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC092933.1-201ENST00000393644 945 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 KRT17P7-201ENST00000451704 1104 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC026434.2-201ENST00000506094 1078 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC106760.1-201ENST00000508690 800 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AC145423.3-201ENST00000615987 467 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms