Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC007551.1-201ENST00000457394 519 ntBASIC15.07■□□□□ 0
TRAM1L1Q8N609 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 RN7SL48P-201ENST00000579283 293 ntBASIC15.07■□□□□ 0
TRAM1L1Q8N609 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 AC132938.4-201ENST00000623835 848 ntBASIC15.07■□□□□ 0
TRAM1L1Q8N609 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.07■□□□□ 0
TRAM1L1Q8N609 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 NORAD-201ENST00000565493 5339 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 AGAP7P-201ENST00000582299 2062 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 AGAP14-201ENST00000624701 2060 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CROCCP4-201ENST00000457096 498 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 ACA64.2-201ENST00000459014 129 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AL512343.1-201ENST00000605837 169 ntBASIC15.06■□□□□ 0
TRAM1L1Q8N609 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.06■□□□□ 0
TRAM1L1Q8N609 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAM1L1Q8N609 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.05■□□□□ 0
TRAM1L1Q8N609 AL513477.1-201ENST00000602865 2407 ntBASIC15.05■□□□□ 0
TRAM1L1Q8N609 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TRAM1L1Q8N609 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.05■□□□□ 0
TRAM1L1Q8N609 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TRAM1L1Q8N609 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.05■□□□□ 0
TRAM1L1Q8N609 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAM1L1Q8N609 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAM1L1Q8N609 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAM1L1Q8N609 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms