Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 KRT18P43-201ENST00000469825 1281 ntBASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AC055876.2-201ENST00000531834 546 ntBASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AC136621.1-201ENST00000624017 2304 ntBASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 PCDHA3-202ENST00000532566 4594 ntBASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 AC098850.1-201ENST00000419919 790 ntBASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 AC190387.1-201ENST00000551683 408 ntBASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 SPDYE22P-201ENST00000582158 798 ntBASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C11orf42Q8N5U0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms