Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 IL9RP3-201ENST00000442856 1674 ntBASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.98□□□□□ -0.17
COL27A1Q8IZC6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC097065.1-201ENST00000425737 517 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC026320.2-201ENST00000434379 478 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 CHCHD2P9-201ENST00000461726 456 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 TMBIM7P-203ENST00000641617 1718 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AHCYP4-201ENST00000419201 1315 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AL807761.2-201ENST00000422849 729 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 AC090502.4-201ENST00000551714 1386 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL27A1Q8IZC6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.96□□□□□ -0.17
COL27A1Q8IZC6 BANF1P3-201ENST00000412556 261 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms