Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL133215.2-201ENST00000609242 977 ntBASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AC055717.3-201ENST00000622967 595 ntBASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRTM1Q86UE6 ZNF259P1-201ENST00000407656 1365 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AL133267.1-201ENST00000398220 340 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 MED15P5-201ENST00000423150 992 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KRT18P64-201ENST00000434946 1219 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AC027601.4-201ENST00000611259 610 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KRT8P12-202ENST00000472924 1397 ntBASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRTM1Q86UE6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms