Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 MIR193BHG-211ENST00000641433 5365 ntBASIC10.24□□□□□ -0.77
SCXQ7RTU7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 KRT8P12-202ENST00000472924 1397 ntBASIC10.24□□□□□ -0.77
SCXQ7RTU7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.24□□□□□ -0.77
SCXQ7RTU7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCXQ7RTU7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 PPT1-215ENST00000641471 2368 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 OR8S1-201ENST00000310194 1080 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 MIR6069-201ENST00000620069 79 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AC022532.1-201ENST00000624563 1728 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 AL391825.1-201ENST00000457671 1364 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 U82695.1-201ENST00000635752 1889 ntBASIC10.23□□□□□ -0.77
SCXQ7RTU7 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCXQ7RTU7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.23□□□□□ -0.77
SCXQ7RTU7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms