Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.24□□□□□ -0.13
CHMP1BQ7LBR1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC015922.1-201ENST00000421102 1152 ntBASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC055876.2-201ENST00000531834 546 ntBASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AL662799.1-202ENST00000614205 422 ntBASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AC079781.5-202ENST00000641784 3743 ntBASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHMP1BQ7LBR1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC011477.6-201ENST00000604980 1927 ntBASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC140912.1-201ENST00000577171 1054 ntBASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 Z97205.2-201ENST00000564697 1639 ntBASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP1BQ7LBR1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms