Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 AC023024.2-201ENST00000623561 1993 ntBASIC14.23□□□□□ -0.13
TUBA1AQ71U36 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TUBA1AQ71U36 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AL928921.2-201ENST00000641325 2442 ntBASIC14.22□□□□□ -0.13
TUBA1AQ71U36 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 FAM220BP-201ENST00000377689 816 ntBASIC14.22□□□□□ -0.13
TUBA1AQ71U36 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AL356585.2-201ENST00000625078 2396 ntBASIC14.22□□□□□ -0.13
TUBA1AQ71U36 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TUBA1AQ71U36 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 FAM86GP-201ENST00000448322 971 ntBASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AC069262.1-201ENST00000539058 672 ntBASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AC027796.2-201ENST00000575326 344 ntBASIC14.21□□□□□ -0.13
TUBA1AQ71U36 AC018529.1-201ENST00000613063 361 ntBASIC14.21□□□□□ -0.13
TUBA1AQ71U36 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TUBA1AQ71U36 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms