Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST2H3AQ71DI3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 AL512638.1-201ENST00000457493 794 ntBASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 ACE3P-201ENST00000423435 1973 ntBASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST2H3AQ71DI3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PCDHA3-202ENST00000532566 4594 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 AC104794.3-201ENST00000566840 1248 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SAMD11P1-201ENST00000571429 661 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST2H3AQ71DI3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms