Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
H3F3CQ6NXT2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC105250.1-201ENST00000509378 2057 ntBASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC092127.1-201ENST00000567093 3455 ntBASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 CD8B2-202ENST00000417670 633 ntBASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 SAMD11P1-201ENST00000571429 661 ntBASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AC148477.4-201ENST00000613430 1793 ntBASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H3F3CQ6NXT2 REXO1L6P-201ENST00000603433 1515 ntBASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 RNA5SP486-201ENST00000515961 83 ntBASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 RN7SL48P-201ENST00000579283 293 ntBASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms