Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 KRT90P-201ENST00000549264 1064 ntBASIC13.84□□□□□ -0.19
RTL6Q6ICC9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 TUBB1P2-201ENST00000422712 1306 ntBASIC13.84□□□□□ -0.19
RTL6Q6ICC9 TUBB1P1-201ENST00000503144 1300 ntBASIC13.84□□□□□ -0.19
RTL6Q6ICC9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTL6Q6ICC9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.83□□□□□ -0.19
RTL6Q6ICC9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AC138969.2-201ENST00000532739 9932 ntBASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AC020658.6-201ENST00000623564 1870 ntBASIC13.83□□□□□ -0.2
RTL6Q6ICC9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AC026954.1-201ENST00000429771 1293 ntBASIC13.83□□□□□ -0.2
RTL6Q6ICC9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 MIR4525-201ENST00000580000 75 ntBASIC13.83□□□□□ -0.2
RTL6Q6ICC9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTL6Q6ICC9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 AL138799.1-201ENST00000448213 1675 ntBASIC13.82□□□□□ -0.2
RTL6Q6ICC9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.82□□□□□ -0.2
RTL6Q6ICC9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTL6Q6ICC9 FAM21FP-201ENST00000426241 1131 ntBASIC13.82□□□□□ -0.2
RTL6Q6ICC9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms