Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 AC026470.1-201ENST00000478038 846 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 AC090820.1-201ENST00000519722 591 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 GOLGA2P7-209ENST00000560408 745 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 MIR2392-201ENST00000584881 84 ntBASIC14.57□□□□□ -0.08
RIF1Q5UIP0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RIF1Q5UIP0 WASH7P-201ENST00000488147 1351 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC008825.2-201ENST00000603374 718 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC105020.1-201ENST00000435356 2205 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 MARK2P16-201ENST00000605714 1723 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC020910.5-201ENST00000623668 1865 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 FAM197Y6-201ENST00000420524 766 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC114947.1-202ENST00000514136 344 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC007326.1-201ENST00000604539 458 ntBASIC14.56□□□□□ -0.08
RIF1Q5UIP0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RIF1Q5UIP0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL512306.1-201ENST00000432698 848 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AC113347.2-201ENST00000512350 279 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AC092612.1-201ENST00000514501 998 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL139384.1-201ENST00000612143 3047 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 MIR1301-201ENST00000408518 82 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 AL451000.1-201ENST00000451300 1186 ntBASIC14.55□□□□□ -0.08
RIF1Q5UIP0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms