Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATPAF1Q5TC12 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AC006504.5-208ENST00000588784 2401 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 REXO1L1P-202ENST00000608646 1974 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RPL37AP1-201ENST00000412502 279 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 PHKG1P2-201ENST00000457537 863 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SERBP1P3-201ENST00000459980 809 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AC097493.3-201ENST00000509725 367 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RFPL4AP1-201ENST00000530883 850 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AL359183.1-201ENST00000623796 2132 ntBASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ATPAF1Q5TC12 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AL080243.2-201ENST00000418783 582 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms