Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 RPL13AP23-201ENST00000480739 586 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 KRT8P48-201ENST00000515599 1220 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 SLC25A39P2-201ENST00000537614 270 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC084121.4-201ENST00000641598 221 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AF228730.8-201ENST00000642140 221 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC087386.2-201ENST00000623212 4637 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AL359881.3-201ENST00000602640 1721 ntBASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PTENP1-202ENST00000532280 3996 ntBASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AC104457.1-201ENST00000401024 814 ntBASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SPDYE17-201ENST00000412399 783 ntBASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AC105021.1-202ENST00000570572 669 ntBASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms