Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 AL133466.1-201ENST00000447582 150 ntBASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 SPTLC1P5-201ENST00000450718 252 ntBASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AL354989.2-201ENST00000435838 1540 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AC079178.1-201ENST00000420915 656 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 FTLP1-201ENST00000449155 526 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 SERPINA13P-202ENST00000478994 924 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AC044849.1-201ENST00000519737 1188 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AC007663.3-201ENST00000609632 465 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 AC244157.2-201ENST00000616239 1006 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 MIR7845-201ENST00000618396 99 ntBASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTC1Q2NKJ3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 TUBBP5-203ENST00000508529 1334 ntBASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 FTLP10-202ENST00000505798 471 ntBASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms