Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.67■□□□□ 0.58
DDR1Q08345 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DDR1Q08345 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.67■□□□□ 0.58
DDR1Q08345 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.67■□□□□ 0.58
DDR1Q08345 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.67■□□□□ 0.58
DDR1Q08345 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.67■□□□□ 0.58
DDR1Q08345 AC006122.1-201ENST00000493323 440 ntBASIC18.67■□□□□ 0.58
DDR1Q08345 AC008723.1-201ENST00000506922 207 ntBASIC18.67■□□□□ 0.58
DDR1Q08345 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.67■□□□□ 0.58
DDR1Q08345 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.67■□□□□ 0.58
DDR1Q08345 MIR6769A-201ENST00000617340 73 ntBASIC18.67■□□□□ 0.58
DDR1Q08345 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.67■□□□□ 0.58
DDR1Q08345 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DDR1Q08345 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 CYP4F23P-201ENST00000593402 1579 ntBASIC18.67■□□□□ 0.58
DDR1Q08345 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
DDR1Q08345 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.66■□□□□ 0.58
DDR1Q08345 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.66■□□□□ 0.58
DDR1Q08345 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.66■□□□□ 0.58
DDR1Q08345 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 AC015909.3-201ENST00000572855 1794 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 AC234644.1-201ENST00000406065 370 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 AC012362.1-201ENST00000434906 739 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 AL157407.1-201ENST00000435784 904 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 AL645933.1-201ENST00000440087 609 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 AC130709.1-201ENST00000484779 1212 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.66■□□□□ 0.58
DDR1Q08345 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.66■□□□□ 0.58
DDR1Q08345 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.66■□□□□ 0.58
DDR1Q08345 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.66■□□□□ 0.58
DDR1Q08345 AL161773.1-201ENST00000624845 863 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 CICP13-201ENST00000422015 2789 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 FRMPD2B-201ENST00000431305 1347 ntBASIC18.66■□□□□ 0.58
DDR1Q08345 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.66■□□□□ 0.58
DDR1Q08345 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDR1Q08345 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 AL596257.1-201ENST00000641463 2694 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 LINC01165-201ENST00000445190 1623 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DDR1Q08345 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.65■□□□□ 0.58
DDR1Q08345 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 CICP12-201ENST00000455801 843 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 RPL18AP3-201ENST00000462885 528 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.65■□□□□ 0.58
DDR1Q08345 MIR4522-201ENST00000584932 87 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 MIR6858-201ENST00000620733 67 ntBASIC18.65■□□□□ 0.58
DDR1Q08345 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DDR1Q08345 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDR1Q08345 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms