Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AL157414.3-201ENST00000624276 1954 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 TNRC18P2-201ENST00000417666 2714 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 RNU1-114P-201ENST00000365297 166 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AP006294.1-201ENST00000415407 339 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 HLA-K-203ENST00000430151 1046 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AL033527.5-201ENST00000641382 801 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PRSS30P-206ENST00000641773 873 ntBASIC14.42□□□□□ -0.1
TNFRSF17Q02223 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF17Q02223 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC025048.6-201ENST00000634326 1161 ntBASIC14.41□□□□□ -0.1
TNFRSF17Q02223 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 LILRP1-201ENST00000444199 1370 ntBASIC14.41□□□□□ -0.1
TNFRSF17Q02223 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms