Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.02■□□□□ 0.15
IRX4P78413 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
IRX4P78413 AC134407.2-201ENST00000625089 1978 ntBASIC16.02■□□□□ 0.15
IRX4P78413 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IRX4P78413 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
IRX4P78413 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 AC007686.3-201ENST00000619017 3487 ntBASIC16.01■□□□□ 0.15
IRX4P78413 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 AC091951.1-201ENST00000512854 2465 ntBASIC16.01■□□□□ 0.15
IRX4P78413 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 AL133338.1-201ENST00000565695 1517 ntBASIC16.01■□□□□ 0.15
IRX4P78413 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 ANKRD19P-201ENST00000338192 862 ntBASIC16.01■□□□□ 0.15
IRX4P78413 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.01■□□□□ 0.15
IRX4P78413 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.01■□□□□ 0.15
IRX4P78413 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.01■□□□□ 0.15
IRX4P78413 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IRX4P78413 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.01■□□□□ 0.15
IRX4P78413 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
IRX4P78413 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IRX4P78413 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IRX4P78413 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16■□□□□ 0.15
IRX4P78413 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16■□□□□ 0.15
IRX4P78413 BOLA2P3-201ENST00000404566 256 ntBASIC16■□□□□ 0.15
IRX4P78413 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 NME6-203ENST00000415644 849 ntTSL 2 BASIC16■□□□□ 0.15
IRX4P78413 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16■□□□□ 0.15
IRX4P78413 ACTBP11-201ENST00000436287 1126 ntBASIC16■□□□□ 0.15
IRX4P78413 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IRX4P78413 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
IRX4P78413 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16■□□□□ 0.15
IRX4P78413 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
IRX4P78413 AC061975.2-201ENST00000581722 295 ntBASIC16■□□□□ 0.15
IRX4P78413 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
IRX4P78413 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16■□□□□ 0.15
IRX4P78413 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
IRX4P78413 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16■□□□□ 0.15
IRX4P78413 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16■□□□□ 0.15
IRX4P78413 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
IRX4P78413 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IRX4P78413 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IRX4P78413 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 AC106881.1-201ENST00000605849 3329 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms