Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAE1P78406 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAE1P78406 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
RAE1P78406 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAE1P78406 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAE1P78406 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.47□□□□□ -0.09
RAE1P78406 AC134915.1-201ENST00000426461 574 ntBASIC14.47□□□□□ -0.09
RAE1P78406 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 AC009118.2-201ENST00000613275 655 ntBASIC14.47□□□□□ -0.09
RAE1P78406 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.47□□□□□ -0.09
RAE1P78406 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAE1P78406 AC113367.3-201ENST00000508316 1912 ntBASIC14.47□□□□□ -0.09
RAE1P78406 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.47□□□□□ -0.09
RAE1P78406 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.46□□□□□ -0.09
RAE1P78406 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 AC097359.2-201ENST00000604992 2389 ntBASIC14.46□□□□□ -0.09
RAE1P78406 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 MIR770-201ENST00000390219 98 ntBASIC14.46□□□□□ -0.09
RAE1P78406 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.46□□□□□ -0.09
RAE1P78406 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.46□□□□□ -0.09
RAE1P78406 AC092552.1-201ENST00000547243 906 ntBASIC14.46□□□□□ -0.09
RAE1P78406 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.46□□□□□ -0.09
RAE1P78406 AL359711.2-201ENST00000563105 872 ntBASIC14.46□□□□□ -0.09
RAE1P78406 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.46□□□□□ -0.09
RAE1P78406 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.46□□□□□ -0.09
RAE1P78406 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.46□□□□□ -0.09
RAE1P78406 CHCHD2P3-201ENST00000603038 451 ntBASIC14.46□□□□□ -0.09
RAE1P78406 AC093726.1-201ENST00000608064 963 ntBASIC14.46□□□□□ -0.09
RAE1P78406 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.46□□□□□ -0.09
RAE1P78406 AC007431.3-201ENST00000623221 587 ntBASIC14.46□□□□□ -0.09
RAE1P78406 BX539320.1-201ENST00000623759 877 ntBASIC14.46□□□□□ -0.09
RAE1P78406 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.46□□□□□ -0.09
RAE1P78406 KRT8P22-201ENST00000562317 1415 ntBASIC14.46□□□□□ -0.09
RAE1P78406 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 AP001267.2-201ENST00000532619 2086 ntBASIC14.46□□□□□ -0.09
RAE1P78406 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAE1P78406 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAE1P78406 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAE1P78406 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAE1P78406 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAE1P78406 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAE1P78406 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms