Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 ZNF259P1-201ENST00000407656 1365 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 KRT8P24-201ENST00000560290 1559 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 IL9RP2-201ENST00000423948 1312 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.97□□□□□ -0.17
CXCR4P61073 TPM4P1-201ENST00000436100 807 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 FAM86C2P-203ENST00000528684 1004 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CXCR4P61073 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.97□□□□□ -0.17
CXCR4P61073 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CXCR4P61073 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CXCR4P61073 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 AC105206.1-202ENST00000314927 2368 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 AC027612.1-201ENST00000445234 2395 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 PPT1-213ENST00000641319 2388 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 KRT8P22-201ENST00000562317 1415 ntBASIC13.97□□□□□ -0.17
CXCR4P61073 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CXCR4P61073 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
CXCR4P61073 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CXCR4P61073 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CXCR4P61073 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CXCR4P61073 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CXCR4P61073 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CXCR4P61073 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CXCR4P61073 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CXCR4P61073 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CXCR4P61073 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.96□□□□□ -0.17
CXCR4P61073 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.96□□□□□ -0.17
CXCR4P61073 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms