Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH4P55283 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH4P55283 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH4P55283 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.58■□□□□ 0.09
CDH4P55283 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH4P55283 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH4P55283 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH4P55283 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 ANKRD19P-201ENST00000338192 862 ntBASIC15.58■□□□□ 0.08
CDH4P55283 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.58■□□□□ 0.08
CDH4P55283 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH4P55283 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH4P55283 RNA5SP486-201ENST00000515961 83 ntBASIC15.58■□□□□ 0.08
CDH4P55283 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 AL359881.2-201ENST00000602973 570 ntBASIC15.58■□□□□ 0.08
CDH4P55283 ENPP7P14-201ENST00000621765 1040 ntBASIC15.58■□□□□ 0.08
CDH4P55283 RHOXF1P1-202ENST00000635473 501 ntBASIC15.58■□□□□ 0.08
CDH4P55283 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 REXO1L2P-201ENST00000425429 2069 ntBASIC15.58■□□□□ 0.08
CDH4P55283 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH4P55283 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH4P55283 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH4P55283 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AC023157.3-201ENST00000619086 2088 ntBASIC15.57■□□□□ 0.08
CDH4P55283 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 TPM3P8-201ENST00000330554 643 ntBASIC15.57■□□□□ 0.08
CDH4P55283 MIR658-201ENST00000385210 100 ntBASIC15.57■□□□□ 0.08
CDH4P55283 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDH4P55283 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 FAM197Y7-201ENST00000432892 766 ntBASIC15.57■□□□□ 0.08
CDH4P55283 AC245100.3-201ENST00000441281 285 ntBASIC15.57■□□□□ 0.08
CDH4P55283 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH4P55283 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH4P55283 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AC133552.6-201ENST00000613406 534 ntBASIC15.57■□□□□ 0.08
CDH4P55283 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH4P55283 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
CDH4P55283 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH4P55283 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH4P55283 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH4P55283 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH4P55283 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH4P55283 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH4P55283 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CDH4P55283 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH4P55283 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CDH4P55283 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH4P55283 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH4P55283 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms