Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.7□□□□□ -0.06
EPHA4P54764 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.7□□□□□ -0.06
EPHA4P54764 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.7□□□□□ -0.06
EPHA4P54764 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.7□□□□□ -0.06
EPHA4P54764 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 FAM86HP-204ENST00000513466 959 ntBASIC14.7□□□□□ -0.06
EPHA4P54764 FAM8A2P-201ENST00000528813 1142 ntBASIC14.7□□□□□ -0.06
EPHA4P54764 MIR4538-201ENST00000581377 78 ntBASIC14.7□□□□□ -0.06
EPHA4P54764 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.7□□□□□ -0.06
EPHA4P54764 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.7□□□□□ -0.06
EPHA4P54764 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA4P54764 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EPHA4P54764 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA4P54764 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
EPHA4P54764 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 AC090616.6-203ENST00000579186 1945 ntBASIC14.69□□□□□ -0.06
EPHA4P54764 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
EPHA4P54764 AC022494.1-201ENST00000466044 728 ntBASIC14.69□□□□□ -0.06
EPHA4P54764 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 DUX4L47-201ENST00000566374 394 ntBASIC14.69□□□□□ -0.06
EPHA4P54764 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.69□□□□□ -0.06
EPHA4P54764 EEF1DP1-201ENST00000585891 896 ntBASIC14.69□□□□□ -0.06
EPHA4P54764 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 AC009090.5-201ENST00000624886 2285 ntBASIC14.69□□□□□ -0.06
EPHA4P54764 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EPHA4P54764 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
EPHA4P54764 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EPHA4P54764 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
EPHA4P54764 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA4P54764 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms