Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 AL158070.2-201ENST00000623713 1621 ntBASIC16.82■□□□□ 0.28
PMS1P54277 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PMS1P54277 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 SPDYE19P-201ENST00000338590 713 ntBASIC16.82■□□□□ 0.28
PMS1P54277 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.82■□□□□ 0.28
PMS1P54277 AL353779.1-201ENST00000434793 351 ntBASIC16.82■□□□□ 0.28
PMS1P54277 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.82■□□□□ 0.28
PMS1P54277 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.82■□□□□ 0.28
PMS1P54277 VDAC1P7-201ENST00000462417 847 ntBASIC16.82■□□□□ 0.28
PMS1P54277 AC004066.1-201ENST00000502488 802 ntBASIC16.82■□□□□ 0.28
PMS1P54277 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.82■□□□□ 0.28
PMS1P54277 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.82■□□□□ 0.28
PMS1P54277 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.82■□□□□ 0.28
PMS1P54277 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.82■□□□□ 0.28
PMS1P54277 AL049840.4-201ENST00000602422 811 ntBASIC16.82■□□□□ 0.28
PMS1P54277 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PMS1P54277 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PMS1P54277 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 INTS4P1-203ENST00000641008 3683 ntBASIC16.82■□□□□ 0.28
PMS1P54277 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMS1P54277 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 AC117489.1-201ENST00000625169 3217 ntBASIC16.81■□□□□ 0.28
PMS1P54277 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.81■□□□□ 0.28
PMS1P54277 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PMS1P54277 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.81■□□□□ 0.28
PMS1P54277 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.81■□□□□ 0.28
PMS1P54277 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 TPRX2P-201ENST00000535362 881 ntBASIC16.81■□□□□ 0.28
PMS1P54277 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.81■□□□□ 0.28
PMS1P54277 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PMS1P54277 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 AL137783.1-201ENST00000623494 1896 ntBASIC16.81■□□□□ 0.28
PMS1P54277 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.81■□□□□ 0.28
PMS1P54277 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 AL138799.1-201ENST00000448213 1675 ntBASIC16.81■□□□□ 0.28
PMS1P54277 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PMS1P54277 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMS1P54277 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.8■□□□□ 0.28
PMS1P54277 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms