Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIMK1P53667 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIMK1P53667 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LIMK1P53667 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LIMK1P53667 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.07■□□□□ 0
LIMK1P53667 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIMK1P53667 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 KLF2P2-201ENST00000416807 1039 ntBASIC15.06■□□□□ 0
LIMK1P53667 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.06■□□□□ 0
LIMK1P53667 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.06■□□□□ 0
LIMK1P53667 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
LIMK1P53667 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.06■□□□□ 0
LIMK1P53667 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.06■□□□□ 0
LIMK1P53667 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LIMK1P53667 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 PPT1-215ENST00000641471 2368 ntBASIC15.06■□□□□ 0
LIMK1P53667 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.06■□□□□ 0
LIMK1P53667 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LIMK1P53667 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LIMK1P53667 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.05■□□□□ 0
LIMK1P53667 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.05■□□□□ 0
LIMK1P53667 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LIMK1P53667 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.05■□□□□ 0
LIMK1P53667 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LIMK1P53667 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.05■□□□□ -0
LIMK1P53667 DPM3-202ENST00000368399 517 ntBASIC15.05■□□□□ -0
LIMK1P53667 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.05■□□□□ -0
LIMK1P53667 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.05■□□□□ -0
LIMK1P53667 AL354877.1-201ENST00000424412 413 ntBASIC15.05■□□□□ -0
LIMK1P53667 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.05■□□□□ -0
LIMK1P53667 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.05■□□□□ -0
LIMK1P53667 NOC2LP1-201ENST00000450578 752 ntBASIC15.05■□□□□ -0
LIMK1P53667 AL353637.1-201ENST00000451571 732 ntBASIC15.05■□□□□ -0
LIMK1P53667 AC012618.1-201ENST00000461223 412 ntBASIC15.05■□□□□ -0
LIMK1P53667 AC019193.1-201ENST00000506678 823 ntBASIC15.05■□□□□ -0
LIMK1P53667 AC106794.1-201ENST00000506935 792 ntBASIC15.05■□□□□ -0
LIMK1P53667 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.05■□□□□ -0
LIMK1P53667 NPM1P43-201ENST00000558669 786 ntBASIC15.05■□□□□ -0
LIMK1P53667 ZACNP1-201ENST00000612259 710 ntBASIC15.05■□□□□ -0
LIMK1P53667 AL353770.1-201ENST00000614915 403 ntBASIC15.05■□□□□ -0
LIMK1P53667 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.05■□□□□ -0
LIMK1P53667 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LIMK1P53667 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LIMK1P53667 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.04■□□□□ -0
LIMK1P53667 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LIMK1P53667 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
LIMK1P53667 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 REXO1L1P-202ENST00000608646 1974 ntBASIC15.04■□□□□ -0
LIMK1P53667 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
LIMK1P53667 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.04■□□□□ -0
LIMK1P53667 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.04■□□□□ -0
LIMK1P53667 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.04■□□□□ -0
LIMK1P53667 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms