Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MESTP3-201ENST00000503460 968 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.22□□□□□ -0.29
HCFC1P51610 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.22□□□□□ -0.29
HCFC1P51610 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 BNIP3P13-201ENST00000599968 566 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 AC090164.2-201ENST00000611487 516 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.21□□□□□ -0.29
HCFC1P51610 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HCFC1P51610 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.21□□□□□ -0.29
HCFC1P51610 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.21□□□□□ -0.29
HCFC1P51610 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.21□□□□□ -0.29
HCFC1P51610 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.21□□□□□ -0.29
HCFC1P51610 AC055811.4-201ENST00000624039 1754 ntBASIC13.21□□□□□ -0.29
HCFC1P51610 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.21□□□□□ -0.29
HCFC1P51610 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.21□□□□□ -0.29
HCFC1P51610 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HCFC1P51610 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.21□□□□□ -0.29
HCFC1P51610 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.21□□□□□ -0.29
HCFC1P51610 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.21□□□□□ -0.29
HCFC1P51610 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.21□□□□□ -0.29
HCFC1P51610 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.21□□□□□ -0.29
HCFC1P51610 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HCFC1P51610 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HCFC1P51610 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HCFC1P51610 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HCFC1P51610 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.21□□□□□ -0.3
HCFC1P51610 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.21□□□□□ -0.3
HCFC1P51610 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.21□□□□□ -0.3
HCFC1P51610 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 CHMP1AP1-201ENST00000445563 662 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 AL133466.1-201ENST00000447582 150 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 RN7SL181P-201ENST00000462921 277 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms