Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 AC018529.2-202ENST00000611482 3087 ntBASIC16.65■□□□□ 0.26
CASP4P49662 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CASP4P49662 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.65■□□□□ 0.26
CASP4P49662 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.65■□□□□ 0.26
CASP4P49662 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CASP4P49662 AP005018.1-201ENST00000525475 301 ntBASIC16.65■□□□□ 0.26
CASP4P49662 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.65■□□□□ 0.26
CASP4P49662 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.65■□□□□ 0.26
CASP4P49662 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 AC133539.2-201ENST00000604757 467 ntBASIC16.65■□□□□ 0.26
CASP4P49662 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 BX539320.1-201ENST00000623759 877 ntBASIC16.65■□□□□ 0.26
CASP4P49662 AC025048.6-201ENST00000634326 1161 ntBASIC16.65■□□□□ 0.26
CASP4P49662 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
CASP4P49662 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CASP4P49662 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASP4P49662 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CASP4P49662 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CASP4P49662 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CASP4P49662 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 RNU1-114P-201ENST00000365297 166 ntBASIC16.64■□□□□ 0.25
CASP4P49662 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CASP4P49662 SOCS2P1-201ENST00000417727 557 ntBASIC16.64■□□□□ 0.25
CASP4P49662 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.64■□□□□ 0.25
CASP4P49662 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CASP4P49662 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP4P49662 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP4P49662 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.64■□□□□ 0.25
CASP4P49662 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.64■□□□□ 0.25
CASP4P49662 PRSS30P-206ENST00000641773 873 ntBASIC16.64■□□□□ 0.25
CASP4P49662 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CASP4P49662 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP4P49662 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP4P49662 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.64■□□□□ 0.25
CASP4P49662 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.64■□□□□ 0.25
CASP4P49662 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASP4P49662 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
CASP4P49662 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CASP4P49662 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASP4P49662 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms